Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ush1cQ9ES64 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ush1cQ9ES64 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ush1cQ9ES64 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Gm11539-201ENSMUST00000119837 557 ntBASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Gm13436-201ENSMUST00000120418 567 ntBASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ush1cQ9ES64 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Gm13559-201ENSMUST00000120476 863 ntBASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ush1cQ9ES64 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Efs-202ENSMUST00000227037 2540 ntBASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms