Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-4Q9EQM3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-4Q9EQM3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx2-4Q9EQM3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Gm27838-201ENSMUST00000184829 128 ntBASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Nkx2-4Q9EQM3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-4Q9EQM3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Gm12859-201ENSMUST00000117834 427 ntBASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Gm16026-204ENSMUST00000162652 683 ntBASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Gm44344-201ENSMUST00000200287 129 ntBASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Gm7775-201ENSMUST00000218871 853 ntBASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-4Q9EQM3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms