Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Gm13884-201ENSMUST00000118103 829 ntBASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Gm14722-201ENSMUST00000118943 689 ntBASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a3bpQ9EQG9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Sybu-209ENSMUST00000228639 4113 ntBASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a3bpQ9EQG9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a3bpQ9EQG9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a3bpQ9EQG9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a3bpQ9EQG9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Gm25745-201ENSMUST00000174945 133 ntBASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Mzt1-203ENSMUST00000227948 952 ntBASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a3bpQ9EQG9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Gm11452-201ENSMUST00000122376 690 ntBASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a3bpQ9EQG9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms