Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcfc2Q9D968 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcfc2Q9D968 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcfc2Q9D968 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Efs-202ENSMUST00000227037 2540 ntBASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hcfc2Q9D968 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hcfc2Q9D968 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms