Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Stag1Q9D3E6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Stag1Q9D3E6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Gm44335-201ENSMUST00000196879 141 ntBASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Gm44297-201ENSMUST00000198304 141 ntBASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Gm44346-201ENSMUST00000198851 141 ntBASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag1Q9D3E6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Gm9385-201ENSMUST00000117563 472 ntBASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Gm11745-201ENSMUST00000121669 448 ntBASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Rpph1-201ENSMUST00000175096 319 ntBASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag1Q9D3E6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.29■□□□□ 0.52
Stag1Q9D3E6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Gm16198-201ENSMUST00000118766 670 ntBASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.28■□□□□ 0.52
Stag1Q9D3E6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag1Q9D3E6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Gm2272-201ENSMUST00000194903 582 ntBASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.27■□□□□ 0.52
Stag1Q9D3E6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.27■□□□□ 0.52
Stag1Q9D3E6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms