Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Mir5130-201ENSMUST00000175160 84 ntBASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chaf1bQ9D0N7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chaf1bQ9D0N7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chaf1bQ9D0N7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chaf1bQ9D0N7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
Chaf1bQ9D0N7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chaf1bQ9D0N7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chaf1bQ9D0N7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Gm22240-201ENSMUST00000175225 82 ntBASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Efs-202ENSMUST00000227037 2540 ntBASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chaf1bQ9D0N7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chaf1bQ9D0N7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms