Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ssbp3Q9D032 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Gm11764-201ENSMUST00000120221 623 ntBASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Gm5364-201ENSMUST00000216789 889 ntBASIC12.85□□□□□ -0.35
Ssbp3Q9D032 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.85□□□□□ -0.35
Ssbp3Q9D032 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Gm37153-201ENSMUST00000193637 231 ntBASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssbp3Q9D032 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ssbp3Q9D032 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms