Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim13Q9CYB0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim13Q9CYB0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim13Q9CYB0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim13Q9CYB0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Gm13436-201ENSMUST00000120418 567 ntBASIC14.25□□□□□ -0.13
Trim13Q9CYB0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Gm43799-201ENSMUST00000201845 579 ntBASIC14.25□□□□□ -0.13
Trim13Q9CYB0 Gm44430-201ENSMUST00000203376 995 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms