Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Mir1895-201ENSMUST00000122615 79 ntBASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gm15500-202ENSMUST00000071641 1019 ntBASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Sec61bQ9CQS8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm28923-201ENSMUST00000187755 322 ntBASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm10576-201ENSMUST00000191927 825 ntBASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm45359-201ENSMUST00000210635 427 ntBASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm7229-201ENSMUST00000214719 1007 ntBASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 AC127302.2-201ENSMUST00000215212 268 ntBASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 AC155266.1-201ENSMUST00000220762 904 ntBASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm10175-201ENSMUST00000086013 645 ntBASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Gm5366-201ENSMUST00000215494 1338 ntBASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Sec61bQ9CQS8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gm8839-201ENSMUST00000121279 1645 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms