Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chchd1Q9CQA6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Gm15375-201ENSMUST00000119510 849 ntBASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Gm36967-201ENSMUST00000193814 266 ntBASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chchd1Q9CQA6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Chchd1Q9CQA6 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms