Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ska1Q9CPV1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ska1Q9CPV1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ska1Q9CPV1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ska1Q9CPV1 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.58□□□□□ -0.07
Ska1Q9CPV1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ska1Q9CPV1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ska1Q9CPV1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.56□□□□□ -0.08
Ska1Q9CPV1 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.56□□□□□ -0.08
Ska1Q9CPV1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ska1Q9CPV1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 132.6 ms