Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt88Q9CPR6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt88Q9CPR6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.93□□□□□ -0.18
Krt88Q9CPR6 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Gm37055-201ENSMUST00000191866 133 ntBASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt88Q9CPR6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms