Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.11■□□□□ 0.01
Trim16Q99PP9 Mir6404-201ENSMUST00000183699 94 ntBASIC15.11■□□□□ 0.01
Trim16Q99PP9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim16Q99PP9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim16Q99PP9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.09■□□□□ 0.01
Trim16Q99PP9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Gm15165-201ENSMUST00000118140 502 ntBASIC15.09■□□□□ 0.01
Trim16Q99PP9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.09■□□□□ 0.01
Trim16Q99PP9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.09■□□□□ 0.01
Trim16Q99PP9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim16Q99PP9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim16Q99PP9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim16Q99PP9 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.08■□□□□ 0.01
Trim16Q99PP9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim16Q99PP9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim16Q99PP9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim16Q99PP9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim16Q99PP9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim16Q99PP9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.08■□□□□ 0
Trim16Q99PP9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.08■□□□□ 0
Trim16Q99PP9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.08■□□□□ 0
Trim16Q99PP9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.08■□□□□ 0
Trim16Q99PP9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim16Q99PP9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim16Q99PP9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms