Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Gm2451-201ENSMUST00000199447 999 ntBASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Gm10290-201ENSMUST00000200451 999 ntBASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh15Q99PJ1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh15Q99PJ1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Gm46209-201ENSMUST00000217912 553 ntBASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Gm9797-201ENSMUST00000052902 613 ntBASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh15Q99PJ1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Gm6222-201ENSMUST00000120787 396 ntBASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh15Q99PJ1 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Gm28760-201ENSMUST00000185995 736 ntBASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Gm37917-201ENSMUST00000194711 392 ntBASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Gm9229-201ENSMUST00000222777 126 ntBASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Gm10766-202ENSMUST00000194123 606 ntBASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdh15Q99PJ1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh15Q99PJ1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms