Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.04■□□□□ -0
Msh4Q99MT2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh4Q99MT2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.04■□□□□ -0
Msh4Q99MT2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Msh4Q99MT2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Msh4Q99MT2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Msh4Q99MT2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Msh4Q99MT2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Msh4Q99MT2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Gm6376-201ENSMUST00000209407 580 ntBASIC15.03■□□□□ -0
Msh4Q99MT2 Gm9172-201ENSMUST00000212092 954 ntBASIC15.03■□□□□ -0
Msh4Q99MT2 Gm6296-201ENSMUST00000222599 943 ntBASIC15.03■□□□□ -0
Msh4Q99MT2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.03■□□□□ -0
Msh4Q99MT2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.03■□□□□ -0
Msh4Q99MT2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Msh4Q99MT2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Msh4Q99MT2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.03■□□□□ -0
Msh4Q99MT2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh4Q99MT2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.02■□□□□ -0
Msh4Q99MT2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh4Q99MT2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh4Q99MT2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh4Q99MT2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Msh4Q99MT2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Msh4Q99MT2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh4Q99MT2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh4Q99MT2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Msh4Q99MT2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh4Q99MT2 Gm4459-201ENSMUST00000118750 468 ntBASIC15.02■□□□□ -0
Msh4Q99MT2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Msh4Q99MT2 Gm12497-201ENSMUST00000138778 237 ntBASIC15.02■□□□□ -0
Msh4Q99MT2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.02■□□□□ -0
Msh4Q99MT2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.02■□□□□ -0
Msh4Q99MT2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh4Q99MT2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh4Q99MT2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh4Q99MT2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Msh4Q99MT2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Msh4Q99MT2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Msh4Q99MT2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh4Q99MT2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Msh4Q99MT2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh4Q99MT2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh4Q99MT2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Msh4Q99MT2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh4Q99MT2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Msh4Q99MT2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15□□□□□ -0.01
Msh4Q99MT2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Msh4Q99MT2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Msh4Q99MT2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Msh4Q99MT2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms