Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Mir1247-201ENSMUST00000116706 82 ntBASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Gm11425-201ENSMUST00000119608 498 ntBASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Gm17150-201ENSMUST00000165577 381 ntBASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Gm9682-201ENSMUST00000197505 556 ntBASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Gm9908-201ENSMUST00000211534 448 ntBASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Gm9396-201ENSMUST00000076703 567 ntBASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.93■□□□□ 0.14
Col25a1Q99MQ5 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Gm12742-201ENSMUST00000117326 410 ntBASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Gm45841-201ENSMUST00000207700 164 ntBASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col25a1Q99MQ5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Gm6218-201ENSMUST00000219812 628 ntBASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col25a1Q99MQ5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.9■□□□□ 0.14
Col25a1Q99MQ5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms