Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scrt1Q99M85 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.51□□□□□ -0.25
Scrt1Q99M85 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Scrt1Q99M85 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.5□□□□□ -0.25
Scrt1Q99M85 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.5□□□□□ -0.25
Scrt1Q99M85 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Scrt1Q99M85 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.49□□□□□ -0.25
Scrt1Q99M85 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Gm36967-201ENSMUST00000193814 266 ntBASIC13.49□□□□□ -0.25
Scrt1Q99M85 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scrt1Q99M85 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scrt1Q99M85 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scrt1Q99M85 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scrt1Q99M85 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scrt1Q99M85 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scrt1Q99M85 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scrt1Q99M85 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scrt1Q99M85 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scrt1Q99M85 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scrt1Q99M85 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm13597-201ENSMUST00000121239 375 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm8825-201ENSMUST00000182565 998 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm4518-201ENSMUST00000182638 718 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.48□□□□□ -0.25
Scrt1Q99M85 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms