Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Chmp1b1Q99LU0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Gm27867-201ENSMUST00000184778 125 ntBASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp1b1Q99LU0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp1b1Q99LU0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.58□□□□□ -0.07
Chmp1b1Q99LU0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Chmp1b1Q99LU0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp1b1Q99LU0 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Gm6257-201ENSMUST00000163864 910 ntBASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp1b1Q99LU0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Gm25406-201ENSMUST00000157599 105 ntBASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Gm28033-201ENSMUST00000184224 96 ntBASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp1b1Q99LU0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms