Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cstf1Q99LC2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Grk6-207ENSMUST00000225925 2769 ntBASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cstf1Q99LC2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Rpph1-201ENSMUST00000175096 319 ntBASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Gm43767-201ENSMUST00000198933 381 ntBASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cstf1Q99LC2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Gm13823-201ENSMUST00000119930 345 ntBASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cstf1Q99LC2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms