Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdk9Q99J95 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdk9Q99J95 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Gm7977-201ENSMUST00000193787 748 ntBASIC15.58■□□□□ 0.08
Cdk9Q99J95 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdk9Q99J95 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.57■□□□□ 0.08
Cdk9Q99J95 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Gm16061-201ENSMUST00000122167 857 ntBASIC15.57■□□□□ 0.08
Cdk9Q99J95 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cdk9Q99J95 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Gm7213-201ENSMUST00000215977 950 ntBASIC15.57■□□□□ 0.08
Cdk9Q99J95 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Efs-202ENSMUST00000227037 2540 ntBASIC15.57■□□□□ 0.08
Cdk9Q99J95 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdk9Q99J95 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.56■□□□□ 0.08
Cdk9Q99J95 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.56■□□□□ 0.08
Cdk9Q99J95 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.56■□□□□ 0.08
Cdk9Q99J95 Gm2274-201ENSMUST00000184539 609 ntBASIC15.56■□□□□ 0.08
Cdk9Q99J95 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Gm10566-201ENSMUST00000086739 996 ntBASIC15.56■□□□□ 0.08
Cdk9Q99J95 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms