Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb6Q91XZ4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Gm7153-201ENSMUST00000117092 455 ntBASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb6Q91XZ4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 Gm5682-201ENSMUST00000173402 505 ntBASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb6Q91XZ4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb6Q91XZ4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gm7862-201ENSMUST00000121461 292 ntBASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gm18489-201ENSMUST00000172565 551 ntBASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms