Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Gm27646-201ENSMUST00000183989 110 ntBASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Gm8000-201ENSMUST00000188378 592 ntBASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga9Q91XX9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Gm6089-201ENSMUST00000197666 938 ntBASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga9Q91XX9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga9Q91XX9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.22■□□□□ 0.03
Pcdhga9Q91XX9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms