Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3d19Q91X43 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sh3d19Q91X43 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Gm5867-201ENSMUST00000063197 592 ntBASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sh3d19Q91X43 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Sh3d19Q91X43 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.02■□□□□ 0.15
Sh3d19Q91X43 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d19Q91X43 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d19Q91X43 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Sh3d19Q91X43 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d19Q91X43 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d19Q91X43 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Gm5177-201ENSMUST00000183092 997 ntBASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Gm2213-201ENSMUST00000197485 688 ntBASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sh3d19Q91X43 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms