Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx41Q91VN6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Gm14140-201ENSMUST00000119999 995 ntBASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Gm15467-201ENSMUST00000120582 445 ntBASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Ddx41Q91VN6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ddx41Q91VN6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx41Q91VN6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms