Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H1fooQ8VIK3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.94□□□□□ -0.34
H1fooQ8VIK3 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H1fooQ8VIK3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
H1fooQ8VIK3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Gm15372-201ENSMUST00000120729 834 ntBASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
H1fooQ8VIK3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms