Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SfpqQ8VIJ6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SfpqQ8VIJ6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfpqQ8VIJ6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SfpqQ8VIJ6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.29■□□□□ 0.2
SfpqQ8VIJ6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfpqQ8VIJ6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfpqQ8VIJ6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfpqQ8VIJ6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfpqQ8VIJ6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
SfpqQ8VIJ6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfpqQ8VIJ6 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SfpqQ8VIJ6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.27■□□□□ 0.19
SfpqQ8VIJ6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SfpqQ8VIJ6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SfpqQ8VIJ6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SfpqQ8VIJ6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Gm10013-201ENSMUST00000106074 672 ntBASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SfpqQ8VIJ6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SfpqQ8VIJ6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SfpqQ8VIJ6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SfpqQ8VIJ6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SfpqQ8VIJ6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SfpqQ8VIJ6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SfpqQ8VIJ6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SfpqQ8VIJ6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SfpqQ8VIJ6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.25■□□□□ 0.19
SfpqQ8VIJ6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms