Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Gm44454-201ENSMUST00000198541 138 ntBASIC15.97■□□□□ 0.15
Trim60Q8VI40 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Trim60Q8VI40 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.96■□□□□ 0.15
Trim60Q8VI40 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Trim60Q8VI40 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Gm19164-201ENSMUST00000210667 640 ntBASIC15.96■□□□□ 0.15
Trim60Q8VI40 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.96■□□□□ 0.15
Trim60Q8VI40 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim60Q8VI40 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim60Q8VI40 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim60Q8VI40 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim60Q8VI40 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim60Q8VI40 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.95■□□□□ 0.14
Trim60Q8VI40 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Mir3081-201ENSMUST00000175305 84 ntBASIC15.95■□□□□ 0.14
Trim60Q8VI40 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Trim60Q8VI40 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.95■□□□□ 0.14
Trim60Q8VI40 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.95■□□□□ 0.14
Trim60Q8VI40 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.95■□□□□ 0.14
Trim60Q8VI40 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim60Q8VI40 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.94■□□□□ 0.14
Trim60Q8VI40 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 AA414768-201ENSMUST00000121924 1257 ntBASIC15.94■□□□□ 0.14
Trim60Q8VI40 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Gm23634-201ENSMUST00000175071 91 ntBASIC15.94■□□□□ 0.14
Trim60Q8VI40 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim60Q8VI40 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms