Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Gm27680-201ENSMUST00000184192 160 ntBASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cspg4Q8VHY0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Gm9257-201ENSMUST00000221254 232 ntBASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cspg4Q8VHY0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cspg4Q8VHY0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Gm8318-201ENSMUST00000182954 872 ntBASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cspg4Q8VHY0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Gm6745-201ENSMUST00000199216 526 ntBASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.19□□□□□ -0.3
Cspg4Q8VHY0 Gm18827-201ENSMUST00000188341 790 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms