Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Gm22697-201ENSMUST00000175194 63 ntBASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Gm21559-201ENSMUST00000220638 855 ntBASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Gm8587-201ENSMUST00000076538 843 ntBASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh18Q8VHR0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Gm18101-201ENSMUST00000215769 548 ntBASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh18Q8VHR0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh18Q8VHR0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh18Q8VHR0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh18Q8VHR0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh18Q8VHR0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh18Q8VHR0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms