Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg1dQ8VE91 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg1dQ8VE91 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 AV026068-213ENSMUST00000223675 1171 ntBASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retreg1dQ8VE91 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retreg1dQ8VE91 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retreg1dQ8VE91 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Gm7222-201ENSMUST00000117512 906 ntBASIC15.27■□□□□ 0.04
Retreg1dQ8VE91 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms