Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Lsm1Q8VC85 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm1Q8VC85 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Gm27867-201ENSMUST00000184778 125 ntBASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Gm27704-201ENSMUST00000185094 107 ntBASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Gm18622-201ENSMUST00000219361 595 ntBASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm1Q8VC85 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lsm1Q8VC85 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm1Q8VC85 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm1Q8VC85 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm1Q8VC85 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm1Q8VC85 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Lsm1Q8VC85 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm1Q8VC85 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Lsm1Q8VC85 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lsm1Q8VC85 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms