Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Vps39Q8R5L3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Gm7284-201ENSMUST00000131667 944 ntBASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Gm25745-201ENSMUST00000174945 133 ntBASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Gm33142-201ENSMUST00000193913 867 ntBASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Vps39Q8R5L3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vps39Q8R5L3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vps39Q8R5L3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vps39Q8R5L3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Vps39Q8R5L3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vps39Q8R5L3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Gm14722-201ENSMUST00000118943 689 ntBASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Gm15372-201ENSMUST00000120729 834 ntBASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Gm12497-201ENSMUST00000138778 237 ntBASIC15.45■□□□□ 0.06
Vps39Q8R5L3 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.45■□□□□ 0.06
Vps39Q8R5L3 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vps39Q8R5L3 BC037039-201ENSMUST00000192003 2205 ntBASIC15.44■□□□□ 0.06
Vps39Q8R5L3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Vps39Q8R5L3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms