Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Gm12134-201ENSMUST00000122109 520 ntBASIC12.6□□□□□ -0.39
Nup35Q8R4R6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Gm27389-201ENSMUST00000183622 195 ntBASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Gm10812-201ENSMUST00000099864 546 ntBASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup35Q8R4R6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Gm45058-201ENSMUST00000205810 766 ntBASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup35Q8R4R6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nup35Q8R4R6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nup35Q8R4R6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Gm13559-201ENSMUST00000120476 863 ntBASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup35Q8R4R6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nup35Q8R4R6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms