Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp7Q8R1T1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp7Q8R1T1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp7Q8R1T1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp7Q8R1T1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Chmp7Q8R1T1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Gm7774-201ENSMUST00000200064 533 ntBASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Chmp7Q8R1T1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Gm22175-201ENSMUST00000175007 78 ntBASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp7Q8R1T1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Chmp7Q8R1T1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp7Q8R1T1 Gm22065-201ENSMUST00000103753 110 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms