Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shtn1Q8K2Q9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Haglr-201ENSMUST00000100000 2085 ntBASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shtn1Q8K2Q9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Gm5866-201ENSMUST00000177881 973 ntBASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shtn1Q8K2Q9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shtn1Q8K2Q9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shtn1Q8K2Q9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Shtn1Q8K2Q9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shtn1Q8K2Q9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Shtn1Q8K2Q9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Shtn1Q8K2Q9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shtn1Q8K2Q9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shtn1Q8K2Q9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms