Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim68Q8K243 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim68Q8K243 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim68Q8K243 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.73■□□□□ 0.27
Trim68Q8K243 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim68Q8K243 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim68Q8K243 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim68Q8K243 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.73■□□□□ 0.27
Trim68Q8K243 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim68Q8K243 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim68Q8K243 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim68Q8K243 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Trim68Q8K243 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim68Q8K243 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim68Q8K243 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim68Q8K243 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim68Q8K243 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Gm27300-201ENSMUST00000184085 97 ntBASIC16.72■□□□□ 0.27
Trim68Q8K243 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim68Q8K243 Gm27335-201ENSMUST00000184758 97 ntBASIC16.72■□□□□ 0.27
Trim68Q8K243 Gm27321-201ENSMUST00000185021 205 ntBASIC16.72■□□□□ 0.27
Trim68Q8K243 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Trim68Q8K243 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim68Q8K243 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim68Q8K243 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim68Q8K243 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim68Q8K243 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim68Q8K243 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim68Q8K243 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Gm8396-201ENSMUST00000057361 823 ntBASIC16.71■□□□□ 0.27
Trim68Q8K243 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim68Q8K243 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Trim68Q8K243 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim68Q8K243 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim68Q8K243 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim68Q8K243 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim68Q8K243 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim68Q8K243 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim68Q8K243 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trim68Q8K243 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.7■□□□□ 0.26
Trim68Q8K243 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.7■□□□□ 0.26
Trim68Q8K243 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trim68Q8K243 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trim68Q8K243 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim68Q8K243 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim68Q8K243 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim68Q8K243 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim68Q8K243 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trim68Q8K243 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim68Q8K243 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim68Q8K243 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim68Q8K243 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim68Q8K243 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim68Q8K243 Gm4899-201ENSMUST00000178708 719 ntBASIC16.69■□□□□ 0.26
Trim68Q8K243 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim68Q8K243 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim68Q8K243 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim68Q8K243 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms