Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.78■□□□□ 0.44
Rtn1Q8K0T0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.78■□□□□ 0.44
Rtn1Q8K0T0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Rtn1Q8K0T0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rtn1Q8K0T0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn1Q8K0T0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn1Q8K0T0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.78■□□□□ 0.44
Rtn1Q8K0T0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn1Q8K0T0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn1Q8K0T0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn1Q8K0T0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Mzt1-203ENSMUST00000227948 952 ntBASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Rtn1Q8K0T0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn1Q8K0T0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.77■□□□□ 0.43
Rtn1Q8K0T0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn1Q8K0T0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn1Q8K0T0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn1Q8K0T0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn1Q8K0T0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 AV026068-213ENSMUST00000223675 1171 ntBASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn1Q8K0T0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Gm18489-201ENSMUST00000172565 551 ntBASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn1Q8K0T0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms