Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm27989-201ENSMUST00000184721 107 ntBASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm17837-201ENSMUST00000186435 985 ntBASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4rl1Q8K0S5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm18737-201ENSMUST00000173594 937 ntBASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm29541-201ENSMUST00000191351 678 ntBASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
Rtn4rl1Q8K0S5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn4rl1Q8K0S5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm23547-201ENSMUST00000158210 271 ntBASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm9824-201ENSMUST00000178707 561 ntBASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms