Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Mir6982-201ENSMUST00000184354 68 ntBASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox30Q8CGW4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sox30Q8CGW4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox30Q8CGW4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox30Q8CGW4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox30Q8CGW4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox30Q8CGW4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Gm4459-201ENSMUST00000118750 468 ntBASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Gm15358-201ENSMUST00000119249 520 ntBASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox30Q8CGW4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms