Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rbm28Q8CGC6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Mir3113-201ENSMUST00000175478 76 ntBASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rbm28Q8CGC6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.21■□□□□ 0.5
Rbm28Q8CGC6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Rbm28Q8CGC6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Gm14822-201ENSMUST00000122247 291 ntBASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rbm28Q8CGC6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Gm27300-201ENSMUST00000184085 97 ntBASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Gm27335-201ENSMUST00000184758 97 ntBASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rbm28Q8CGC6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm28Q8CGC6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms