Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcpip1Q8CDG3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcpip1Q8CDG3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Gm25925-201ENSMUST00000158314 306 ntBASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Efs-202ENSMUST00000227037 2540 ntBASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vcpip1Q8CDG3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm15372-201ENSMUST00000120729 834 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm8825-201ENSMUST00000182565 998 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm4518-201ENSMUST00000182638 718 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm6443-201ENSMUST00000203599 874 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vcpip1Q8CDG3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms