Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Gm15590-201ENSMUST00000078419 552 ntBASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps53Q8CCB4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Gm2756-201ENSMUST00000195851 400 ntBASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps53Q8CCB4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.91■□□□□ 0.46
Vps53Q8CCB4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps53Q8CCB4 App-207ENSMUST00000227737 2827 ntBASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Gm12260-201ENSMUST00000122447 411 ntBASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 AV026068-213ENSMUST00000223675 1171 ntBASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps53Q8CCB4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms