Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.84■□□□□ 0.45
Shisa4Q8CA71 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa4Q8CA71 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa4Q8CA71 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Shisa4Q8CA71 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa4Q8CA71 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa4Q8CA71 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa4Q8CA71 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa4Q8CA71 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Gm15920-201ENSMUST00000118998 402 ntBASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Gm14057-201ENSMUST00000120631 482 ntBASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Gm5177-201ENSMUST00000183092 997 ntBASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.83■□□□□ 0.44
Shisa4Q8CA71 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa4Q8CA71 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Celf4-206ENSMUST00000224553 1729 ntBASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Gm25911-201ENSMUST00000157621 56 ntBASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Gm26308-201ENSMUST00000157768 69 ntBASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa4Q8CA71 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms