Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx1Q8C8B0 Celf4-206ENSMUST00000224553 1729 ntBASIC17.95■□□□□ 0.46
Alx1Q8C8B0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Gm12260-201ENSMUST00000122447 411 ntBASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Mir8117-201ENSMUST00000184773 107 ntBASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Gm17968-201ENSMUST00000194902 784 ntBASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx1Q8C8B0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Gm12008-201ENSMUST00000117791 755 ntBASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Gm14494-201ENSMUST00000118786 435 ntBASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Gm5264-201ENSMUST00000190584 848 ntBASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx1Q8C8B0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Alx1Q8C8B0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Gm5177-201ENSMUST00000183092 997 ntBASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Gm8000-201ENSMUST00000188378 592 ntBASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Gm2272-201ENSMUST00000194903 582 ntBASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.91■□□□□ 0.46
Alx1Q8C8B0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms