Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Gm23935-201ENSMUST00000102303 57 ntBASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Gm24270-201ENSMUST00000102326 57 ntBASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Gm11780-201ENSMUST00000136880 516 ntBASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Gm24245-201ENSMUST00000157318 57 ntBASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pabpc5Q8C7D3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Gm7230-201ENSMUST00000173026 815 ntBASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Gm6089-201ENSMUST00000197666 938 ntBASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pabpc5Q8C7D3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Gm24513-201ENSMUST00000174964 138 ntBASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Gm27397-201ENSMUST00000184997 107 ntBASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Pabpc5Q8C7D3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pabpc5Q8C7D3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms