Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a6Q8C6K9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Gm8318-201ENSMUST00000182954 872 ntBASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Gm11543-201ENSMUST00000120758 370 ntBASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a6Q8C6K9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Gm25857-201ENSMUST00000082788 129 ntBASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a6Q8C6K9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Gm12490-201ENSMUST00000120255 560 ntBASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Gm27680-201ENSMUST00000184192 160 ntBASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.86□□□□□ -0.19
Col6a6Q8C6K9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms