Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Gm27000-201ENSMUST00000182943 842 ntBASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tsen54Q8C2A2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tsen54Q8C2A2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Gm22697-201ENSMUST00000175194 63 ntBASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Mir1668-201ENSMUST00000184114 107 ntBASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Gm18101-201ENSMUST00000215769 548 ntBASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Gm18032-201ENSMUST00000222541 538 ntBASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tsen54Q8C2A2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Gm10013-201ENSMUST00000106074 672 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms