Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim47Q8C0E3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim47Q8C0E3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim47Q8C0E3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim47Q8C0E3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim47Q8C0E3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim47Q8C0E3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim47Q8C0E3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Gm4995-201ENSMUST00000117247 432 ntBASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim47Q8C0E3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim47Q8C0E3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim47Q8C0E3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim47Q8C0E3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.03■□□□□ 0.32
Trim47Q8C0E3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms