Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Gm17971-201ENSMUST00000190239 806 ntBASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trub1Q8C0D0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trub1Q8C0D0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trub1Q8C0D0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Gm8318-201ENSMUST00000182954 872 ntBASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.89■□□□□ 0.13
Trub1Q8C0D0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Gm25990-201ENSMUST00000102440 86 ntBASIC15.88■□□□□ 0.13
Trub1Q8C0D0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Gm6089-201ENSMUST00000197666 938 ntBASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.88■□□□□ 0.13
Trub1Q8C0D0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms