Protein–RNA interactions for Protein: Q8BY02

Nkrf, NF-kappa-B-repressing factor, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NkrfQ8BY02 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NkrfQ8BY02 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NkrfQ8BY02 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NkrfQ8BY02 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NkrfQ8BY02 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NkrfQ8BY02 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NkrfQ8BY02 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NkrfQ8BY02 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Gm7063-201ENSMUST00000186840 981 ntBASIC17.21■□□□□ 0.35
NkrfQ8BY02 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.21■□□□□ 0.35
NkrfQ8BY02 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NkrfQ8BY02 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NkrfQ8BY02 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NkrfQ8BY02 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.21■□□□□ 0.34
NkrfQ8BY02 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NkrfQ8BY02 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Gm45747-201ENSMUST00000212203 999 ntBASIC17.2■□□□□ 0.34
NkrfQ8BY02 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.2■□□□□ 0.34
NkrfQ8BY02 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NkrfQ8BY02 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.19■□□□□ 0.34
NkrfQ8BY02 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NkrfQ8BY02 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.19■□□□□ 0.34
NkrfQ8BY02 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NkrfQ8BY02 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms